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Running DeepCell on Google Batch with node pools
Published at
6/15/2024
Categories
googlecloud
serverless
bioinformatics
scale
Author
dchaley
Author
7 person written this
dchaley
open
As part of our ongoing work to run DeepCell on GCP, I'm pleased to share our benchmarking results using Google Batch's private preview feature: node pools.
Node pools allow Batch to reuse infrastructure across jobs, which can improve end-to-end performance for jobs with a lot of setup time (like our 3 GB container). Using a node pool reduced our benchmark time by 80%. π
https://medium.com/@dchaley/running-deepcell-on-google-batch-with-node-pools-8fe7d1c121a2
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